BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029D03LP1|AL429047
(897 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1308 1776 0.0
>3x_Contig1308
Length = 5728
Score = 1776 bits (895), Expect = 0.0
Identities = 896/897 (99%)
Strand = Plus / Plus
Query: 1 atctgaatatcaatatgcaagtggatttggtaatcttcaacaaagttttgaatttggacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 atctgaatatcaatatgcaagtggatttggtaatcttcaacaaagttttgaatttggacc 327
Query: 61 ttgaagaagatgctaaatacaacagattgatacaagtggtgtcttctttaagtttgaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttgaagaagatgctaaatacaacagattgatacaagtggtgtcttctttaagtttgaagg 387
Query: 121 ctctttcatcttttttcgcctttaacaaacgtcaagtacaaatcaataaggcaatgaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ctctttcatcttttttcgcctttaacaaacgtcaagtacaaatcaataaggcaatgaatt 447
Query: 181 cactttttgaattgaagaatgaaaaactcgataaacttatcgaatggttagctgctactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 cactttttgaattgaagaatgaaaaactcgataaacttatcgaatggttagctgctactg 507
Query: 241 ttccgaagcagctcgaaccagtggcaatcactcagaagttccttgaactaaatgattcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ttccgaagcagctcgaaccagtggcaatcactcagaagttccttgaactaaatgattcaa 567
Query: 301 ggataaatcatctaatcaaagtatcaattaatcaggagacggactgtattacactcaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ggataaatcatctaatcaaagtatcaattaatcaggagacggactgtattacactcaaaa 627
Query: 361 actctttgcatgaattaaagataaaattagaagatccggaactatttcgaaagaagggcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 actctttgcatgaattaaagataaaattagaagatccggaactatttcgaaagaagggcg 687
Query: 421 tacgttttggcactatcttcagcagagagtctttcaacaaagtgattttgcttctcgtct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 tacgttttggcactatcttcagcagagagtctttcaacaaagtgattttgcttctcgtct 747
Query: 481 atagggccgcaccattaatatacaatgtatcgtgtatcccctaccttcttaacaattata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 atagggccgcaccattaatatacaatgtatcgtgtatcccctaccttcttaacaattata 807
Query: 541 agagggaccaaaacagcacccttaataacgttatgactcagttgattcaaaatatatctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 agagggaccaaaacagcacccttaataacgttatgactcagttgattcaaaatatatctg 867
Query: 601 agatcaatccctttttattcaaaagccaaacagcatcattaagctccttggttatacaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 agatcaatccctttttattcaaaagccaaacagcatcattaagctccttggttatacaag 927
Query: 661 acaaggatcgatcaaatattggaaagcatgaacaattgaaaactttatacaaaattttca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 acaaggatcgatcaaatattggaaagcatgaacaattgaaaactttatacaaaattttca 987
Query: 721 aagcttttcctagtgaagtaaatcttgaggatggatacctgctagagaaattacagaatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 aagcttttcctagtgaagtaaatcttgaggatggatacctgctagagaaattacagaatt 1047
Query: 781 ttgcaacatcaggcaatatcgctgaaagmaagtatgctgttaaaataatagcactaattc 840
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1048 ttgcaacatcaggcaatatcgctgaaagcaagtatgctgttaaaataatagcactaattc 1107
Query: 841 ctgatagcgaaaaaagacggaaactgttatcattcttacggagttcagcgttgccac 897
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 ctgatagcgaaaaaagacggaaactgttatcattcttacggagttcagcgttgccac 1164
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8527
Number of Sequences: 1807
Number of extensions: 8527
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 897
length of database: 10,358,551
effective HSP length: 16
effective length of query: 881
effective length of database: 10,329,639
effective search space: 9100411959
effective search space used: 9100411959
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)